257 lines
6.5 KiB
C++
257 lines
6.5 KiB
C++
/**
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* Orthanc - A Lightweight, RESTful DICOM Store
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* Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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* Department, University Hospital of Liege, Belgium
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* Copyright (C) 2017-2023 Osimis S.A., Belgium
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* Copyright (C) 2024-2025 Orthanc Team SRL, Belgium
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* Copyright (C) 2021-2025 Sebastien Jodogne, ICTEAM UCLouvain, Belgium
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*
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* This program is free software: you can redistribute it and/or
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* modify it under the terms of the GNU Lesser General Public License
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* as published by the Free Software Foundation, either version 3 of
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* the License, or (at your option) any later version.
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*
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* This program is distributed in the hope that it will be useful, but
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* WITHOUT ANY WARRANTY; without even the implied warranty of
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* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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* Lesser General Public License for more details.
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*
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* You should have received a copy of the GNU Lesser General Public
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* License along with this program. If not, see
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* <http://www.gnu.org/licenses/>.
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**/
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#include "../PrecompiledHeaders.h"
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#include "DicomFindAnswers.h"
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#include "../DicomParsing/FromDcmtkBridge.h"
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#include "../OrthancException.h"
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#include <memory>
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#include <dcmtk/dcmdata/dcfilefo.h>
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#include <boost/noncopyable.hpp>
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namespace Orthanc
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{
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void DicomFindAnswers::AddAnswerInternal(ParsedDicomFile* answer)
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{
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std::unique_ptr<ParsedDicomFile> protection(answer);
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if (isWorklist_)
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{
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// These lines are necessary when serving worklists, otherwise
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// Orthanc does not behave as "wlmscpfs"
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protection->Remove(DICOM_TAG_MEDIA_STORAGE_SOP_INSTANCE_UID);
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protection->Remove(DICOM_TAG_SOP_INSTANCE_UID);
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}
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protection->ChangeEncoding(encoding_);
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answers_.push_back(protection.release());
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}
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DicomFindAnswers::DicomFindAnswers(bool isWorklist) :
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encoding_(GetDefaultDicomEncoding()),
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isWorklist_(isWorklist),
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complete_(true)
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{
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}
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DicomFindAnswers::~DicomFindAnswers()
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{
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Clear();
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}
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Encoding DicomFindAnswers::GetEncoding() const
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{
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return encoding_;
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}
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void DicomFindAnswers::SetEncoding(Encoding encoding)
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{
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for (size_t i = 0; i < answers_.size(); i++)
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{
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assert(answers_[i] != NULL);
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answers_[i]->ChangeEncoding(encoding);
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}
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encoding_ = encoding;
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}
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void DicomFindAnswers::SetWorklist(bool isWorklist)
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{
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if (answers_.empty())
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{
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isWorklist_ = isWorklist;
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}
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else
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{
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// This set of answers is not empty anymore, cannot change its type
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throw OrthancException(ErrorCode_BadSequenceOfCalls);
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}
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}
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bool DicomFindAnswers::IsWorklist() const
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{
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return isWorklist_;
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}
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void DicomFindAnswers::Clear()
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{
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for (size_t i = 0; i < answers_.size(); i++)
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{
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assert(answers_[i] != NULL);
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delete answers_[i];
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}
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answers_.clear();
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}
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void DicomFindAnswers::Reserve(size_t size)
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{
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if (size > answers_.size())
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{
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answers_.reserve(size);
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}
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}
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void DicomFindAnswers::Add(const DicomMap& map)
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{
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// We use the permissive mode to be tolerant wrt. invalid DICOM
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// files that contain some tags with out-of-range values (such
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// tags are removed from the answers)
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AddAnswerInternal(new ParsedDicomFile(map, encoding_, true /* permissive */));
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//"" /* no private creator */));
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}
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void DicomFindAnswers::Add(const ParsedDicomFile& dicom)
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{
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AddAnswerInternal(dicom.Clone(true));
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}
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void DicomFindAnswers::Add(const void* dicom,
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size_t size)
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{
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AddAnswerInternal(new ParsedDicomFile(dicom, size));
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}
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size_t DicomFindAnswers::GetSize() const
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{
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return answers_.size();
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}
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ParsedDicomFile& DicomFindAnswers::GetAnswer(size_t index) const
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{
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if (index < answers_.size())
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{
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return *answers_[index];
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}
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else
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{
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throw OrthancException(ErrorCode_ParameterOutOfRange);
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}
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}
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DcmDataset* DicomFindAnswers::ExtractDcmDataset(size_t index) const
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{
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// As "DicomFindAnswers" stores its content using class
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// "ParsedDicomFile" (that internally uses "DcmFileFormat" from
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// DCMTK), the dataset can contain tags that are reserved if
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// storing the media on the disk, notably tag
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// "MediaStorageSOPClassUID" (0002,0002). In this function, we
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// remove all those tags whose group is below 0x0008. The
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// resulting data set is clean for emission in the C-FIND SCP.
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// http://dicom.nema.org/medical/dicom/current/output/chtml/part04/sect_C.4.html#sect_C.4.1.1.3
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// https://groups.google.com/d/msg/orthanc-users/D3kpPuX8yV0/_zgHOzkMEQAJ
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DcmDataset& source = *GetAnswer(index).GetDcmtkObject().getDataset();
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std::unique_ptr<DcmDataset> target(new DcmDataset);
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for (unsigned long i = 0; i < source.card(); i++)
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{
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const DcmElement* element = source.getElement(i);
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assert(element != NULL);
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if (element != NULL &&
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element->getTag().getGroup() >= 0x0008 &&
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element->getTag().getElement() != 0x0000)
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{
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target->insert(dynamic_cast<DcmElement*>(element->clone()));
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}
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}
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return target.release();
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}
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void DicomFindAnswers::ToJson(Json::Value& target,
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size_t index,
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DicomToJsonFormat format) const
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{
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const ParsedDicomFile& answer = GetAnswer(index);
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answer.DatasetToJson(target, format, DicomToJsonFlags_IncludePrivateTags, 0);
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}
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void DicomFindAnswers::ToJson(Json::Value& target,
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DicomToJsonFormat format) const
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{
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target = Json::arrayValue;
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for (size_t i = 0; i < GetSize(); i++)
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{
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Json::Value answer;
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ToJson(answer, i, format);
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target.append(answer);
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}
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}
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bool DicomFindAnswers::IsComplete() const
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{
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return complete_;
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}
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void DicomFindAnswers::SetComplete(bool isComplete)
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{
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complete_ = isComplete;
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}
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#if ORTHANC_BUILDING_FRAMEWORK_LIBRARY == 1
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void DicomFindAnswers::Add(ParsedDicomFile& dicom)
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{
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return Add(const_cast<const ParsedDicomFile&>(dicom));
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}
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void DicomFindAnswers::ToJson(Json::Value& target,
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size_t index,
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bool simplify) const
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{
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DicomToJsonFormat format = (simplify ? DicomToJsonFormat_Human : DicomToJsonFormat_Full);
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ToJson(target, index, format);
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}
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void DicomFindAnswers::ToJson(Json::Value& target,
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bool simplify) const
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{
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DicomToJsonFormat format = (simplify ? DicomToJsonFormat_Human : DicomToJsonFormat_Full);
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ToJson(target, format);
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}
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#endif
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}
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